BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012H02SP1|AL426429
(775 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig628 1097 0.0
>3x_Contig628
Length = 1864
Score = 1097 bits (542), Expect = 0.0
Identities = 612/649 (94%)
Strand = Plus / Minus
Query: 127 atataactttccaaatatttaatgtatttttgcttgaaaaatttatwatmagcaggaaga 186
|||| ||||||||||||||| |||||||||||||| ||| |||||| || ||||||||||
Sbjct: 1859 atattactttccaaatatttgatgtatttttgcttcaaagatttattatcagcaggaaga 1800
Query: 187 gcccggagtgctctttcaaacaaggggaacatacattcggraccaaaagtcctttmagtc 246
|||||||||||||||||||||||||||||| ||||||||| |||||||||||||| ||||
Sbjct: 1799 gcccggagtgctctttcaaacaaggggaacgtacattcgggaccaaaagtcctttcagtc 1740
Query: 247 cagtmaatataggctcmccaraaatattcgtatcwaaaacatggaatcaaacatcwctma 306
|||| ||||||||||| ||| ||||||||||||| ||||||||||||||||||| || |
Sbjct: 1739 cagtcaatataggctccccagaaatattcgtatcttaaacatggaatcaaacatctctca 1680
Query: 307 aacgtcgattttattaattctgtactgaactcagtgttgttgattaaaaaarawagataa 366
||||||||||||||||||||||||||||||||||||||||||||||| ||| | ||||||
Sbjct: 1679 aacgtcgattttattaattctgtactgaactcagtgttgttgattaagaaagatagataa 1620
Query: 367 gcatcmcaattctaaatctmattctcgggaagctcagggatattgaaaaatggctgtttt 426
||||| ||||||| ||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 1619 gcatcccaattctgaatctcattctcgggaagctcagggatattgaaaaatggctgtttt 1560
Query: 427 atttgtaattcawatgtccatattttgttcaccwtctcctggttagaaataaatgtggta 486
|||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 1559 atttgtgattcatatgtccatattttgttcaccttctcctggttagaaataaatgtggta 1500
Query: 487 tccaaatggatgcttgattccctattagcaaactctgggtgatcttccaagamttcctta 546
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 1499 tccaaatggatgcttgattccctattagcaaactctgggtgatattccaagaattcctta 1440
Query: 547 aagctggtgtagtatcttgcatattgatgcaaaggttgctgcctgacttgtttntncncc 606
|||||||||||||||||||||||||||||||||||||||||| |||||||||| | | ||
Sbjct: 1439 aagctggtgtagtatcttgcatattgatgcaaaggttgctgcatgacttgtttgtacacc 1380
Query: 607 tcaaatacgttttcccagttctgtagtcttgtttcatatgcaatgtgcttatcccaaata 666
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1379 tcaaatacgttttcccagttctgtagtcttgtttcatatgcaatgtgcttatcccaaata 1320
Query: 667 tcgtgcgaaaggaaatraratcacacgagggattcgcatttcctgaactggtttcgtatc 726
|||||||| ||||||| | ||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1319 tcgtgcgagaggaaatgagatcccacgagggattcgcatttcctgaactggtttcgtatc 1260
Query: 727 agttcactatcattctaattatgtgttaaataaacgttcaacatatcaa 775
|||||||||||||||| ||||||||||| ||||||||||||||||||||
Sbjct: 1259 agttcactatcattctgattatgtgttagataaacgttcaacatatcaa 1211
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.40 0.715 1.33
Gapped
Lambda K H
1.40 0.715 1.33
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4522
Number of Sequences: 1807
Number of extensions: 4522
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 775
length of database: 10,358,551
effective HSP length: 16
effective length of query: 759
effective length of database: 10,329,639
effective search space: 7840196001
effective search space used: 7840196001
T: 0
A: 40
X1: 5 (10.1 bits)
X2: 14 (28.3 bits)
S1: 12 (24.8 bits)
S2: 49 (99.7 bits)